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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015930927.1_cds_XP_016477891.1_69574
CDS Infomation

[gene=LOC107799308] [db_xref=GeneID:107799308] [protein=polygalacturonase-like] [protein_id=XP_016477891.1] [location=join(14843..15277,15730..16019,16118..16346,16445..16663)] [gbkey=CDS]
Sequence

ATGAGTTCTTTAGCAATTTTCTCACTTCTCTTTATCTTCCTTTTCCACTTATCATCAGCA
GCAAATACTATGTACAATATCCAAACATTTGGAGCAAAATCCAATGGAAAAACTGATTCA
TCAAAAGCATTTCTAAGTGCATGGGCTGCAGCCTGTGCATCCACTAGCCCGGCCACTATT
TACGTGCCACGTGGAAGTTACTTGATTCGTAATGCATACTTTTATGGTCAAACATGCAAA
AGCAAGGCTATTACTATACGAATTGATGGAACTCTCTTAGCTCCCTCTGATTATAATGTA
ATTGGCAATGCTGGAAATTGGATAAAATTCGAAAAAGTTAACGGAGTTTCCATCTATGGT
GGAATCTTTGATGGACAAGGTGATGGTCTTTGGGATTGCAAAACCTCCGACAAGAATTGT
CCAAAAGGCACTACGGCACTGGCCTTTTACAACTCAAACAACATCATAATCAGTGGAGTA
ACTGCACAAAATAGCCAAATGTTTCACATTTTGGTAGATGGATGCAAAAACGTAAAGCTA
CAAGGAGTGAAGGTCTCAGCTCCAGGAAATAGCCCTAACACCGATGGAATTCACGTACAA
TTATCGACTGAAGTCAGTATTATGAACTGTCATATTGGTACTGGAGATGATTGTATTTCA
ATTGGCCCTGGAAATTCCAACTTATGGATCGAAGGCATTGCTTGTGGCCCTGGCCACGGA
ATCAGCATTGGAAGCTTAGGTTGGAAATTACAAGAGCCTGGAGTCCAAAATGTAACAGTA
AAGAGTGTTACCTTCACTGGAACAGAAAATGGTGTAAGAGTAAAAACTTGGGCAAGGCCT
AGCAATGGCTTTGTAAGAGGTGTTCGCTTTCAACATATAGTTATGACTGATGTTCAAAAT
CCTATTATCATAGACCAAAATTATTGCCCTAATCATGAAAGTTGTCCTCATCAGGGATCG
GGCGTAAAAATAAGTGATATAACGTATCAAGACATACATGGAACATCAGCTACAGAAGTT
GGAGTAAAATTTGATTGTAGCAAAGTGAATCCATGCAGTGGAATAACACTTGAAAATGTG
AATATAAGTTACAAAAATCATCCAGCTGAAGCTTCATGTGTTAATGCTGGTGGAAGAGCT
TCTGGTTTAGAACAACCTACAAGCTGCTTATAA

Peptide Sequence

PEP ID

XP_016477891.1
PEP Infomation

PREDICTED: polygalacturonase-like [Nicotiana tabacum]
Sequence

MSSLAIFSLLFIFLFHLSSAANTMYNIQTFGAKSNGKTDSSKAFLSAWAAACASTSPATI
YVPRGSYLIRNAYFYGQTCKSKAITIRIDGTLLAPSDYNVIGNAGNWIKFEKVNGVSIYG
GIFDGQGDGLWDCKTSDKNCPKGTTALAFYNSNNIIISGVTAQNSQMFHILVDGCKNVKL
QGVKVSAPGNSPNTDGIHVQLSTEVSIMNCHIGTGDDCISIGPGNSNLWIEGIACGPGHG
ISIGSLGWKLQEPGVQNVTVKSVTFTGTENGVRVKTWARPSNGFVRGVRFQHIVMTDVQN
PIIIDQNYCPNHESCPHQGSGVKISDITYQDIHGTSATEVGVKFDCSKVNPCSGITLENV
NISYKNHPAEASCVNAGGRASGLEQPTSCL

Transcript Sequence

Gene sequence data has not been registered.